Guerra-Guimarães L, Pinheiro C, Oliveira ASF, Mira-Jover A, Valverde J, Guedes FAF, Azevedo H, Várzea V, Pajares AJM. 2023. The chloroplast protein HCF164 is predicted to be associated with Coffea SH9 resistance factor against Hemileia vastatrix. Scientific Reports 13, 16019. https://doi.org/10.1038/s41598-023-41950-4
Pinheiro C, Emiliani G, Marino G, Fortunato AS, Haworth M, De Carlo A, Chaves MM, Loreto F, Centritto M. 2023. Metabolic background, not photosynthetic physiology, determines drought and drought recovery responses in C3 and C2 Moricandias. International Journal of Molecular Sciences 24, 4094. https://doi.org/10.3390/ijms24044094
Pinheiro C, Soares David T, Batista P, Guerra-Guimarães L. 2022. Mediterranean woody agroecosystems in a warming and drier climate: the importance of knowledge-based management. Flora 291, doi 10.1016/j.flora.2022.152070
Pinheiro C. 2020. Why Manuela Chaves decided to become a scientist. Letter to the Editor. Theoretical and Experimental Plant Physiology 32, 1–4. doi 10.1007/s40626-020-00169-8
Possa KF, Silva JA, Resende MLV, Tenente RE, Pinheiro C et al. 2020. “Primary metabolism is distinctly modulated by plant resistance inducers in Coffea arabica leaves infected by Hemileia vastatrix”. Frontiers in Plant Science doi: 10.3389/fpls.2020.00309
Costa JM, Marques da Silva J, Pinheiro C, Barón M, Mylona P, Centritto M, Haworth M, Loreto F, Uzilday B, Turkan I, Oliveira MM. 2019. "Opportunities and limitations of crop phenotyping in Southern European countries". Frontiers in Plant Science 10, 1125 doi 10.3389/fpls.2019.01125
Pinheiro C, Weinkoop S, Almeida JMF et al. 2019 "Phellem cell-wall components are discriminants of cork quality in Quercus suber". Frontiers in Plant Science 10, 944 doi 10.3389/fpls.2019.00944
Pinheiro C, Dickinson E, Marriott A et al. 2019 "Distinctive phytohormonal and metabolic profiles of Arabidopsis thaliana and Eutrema salsugineum under similar soil drying". Planta 249, 1417-33 doi 10.1007/s00425-019-03095-5
Pinheiro C, Ribeiro IC, Reisinger V, Planchon S, Veloso MM, Renaut J, Eichacker L, Ricardo CP. 2018. “Salinity effect on germination, seedling growth and cotyledon membrane complexes of a Portuguese salt marsh wild beet ecotype”. Theoretical and Experimental Plant Physiology 30, 113-127 doi 10.1007/s40626-018-0107-4
Teixeira RT, Fortes AM, Bai H, Pinheiro C, Pereira H. 2017. "Transcriptional profiling of cork oak phellogeniccells isolated by laser microdissection". Planta 247, 317-338 doi 10.1007/s00425-017-2786-5
Ribeiro IC, Leclercq CC, Simões N, Toureiro A, Duarte I, Freire JB, Chaves MM, Renaut J, Pinheiro C. 2017."Identification of chickpea seed proteins resistant to simulated in vitro human digestion". Journal of Proteomics 169, 143-52. https://doi.org/10.1016/j.jprot.2017.06.009
Zarrouk O., Brunetti C., Egipto R., Pinheiro C., Genebra T., Gori, A., Lopes C.M, Tattini M., Chaves M.M. 2016. "Grape ripening is regulated by deficit irrigation/elevated temperatures according to cluster position in the canopy". Front. Plant Sci. http://dx.doi.org/10.3389/fpls.2016.01640
Pinheiro C. and Chaves M.M. 2011. “Photosynthesis and drought - can we make metabolic connections from available data?” Journal of Experimental Botany 62, 869-882. doi:10.1093/jxb/erq340 (HIGHLY CITED PAPER in the PLANT & ANIMAL SCIENCE field)